U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Tmem114 transmembrane protein 114 [ Mus musculus (house mouse) ]

    Gene ID: 74720, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tmem114provided by MGI
    Official Full Name
    transmembrane protein 114provided by MGI
    Primary source
    MGI:MGI:1921970
    See related
    Ensembl:ENSMUSG00000022715 AllianceGenome:MGI:1921970
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cldn26; 4930511J11Rik
    Summary
    Located in apical plasma membrane and apicolateral plasma membrane. Is expressed in several structures, including gut; heart; liver; male reproductive gland or organ; and metanephros. Orthologous to human TMEM114 (transmembrane protein 114). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in testis adult (RPKM 8.5), ovary adult (RPKM 1.3) and 2 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Tmem114 in Genome Data Viewer
    Location:
    16 A1; 16 3.84 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (8227140..8243000, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (8409276..8425136, complement)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 29936 Neighboring gene STARR-seq mESC enhancer starr_40003 Neighboring gene CapStarr-seq enhancer MGSCv37_chr16:8406840-8407023 Neighboring gene STARR-positive B cell enhancer ABC_E8615 Neighboring gene predicted gene, 24579 Neighboring gene predicted gene, 30012 Neighboring gene methyltransferase 22, Kin17 lysine Neighboring gene predicted gene, 23706

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2)  1 citation
    • Targeted (2) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in apical plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in apical plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in apicolateral plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    transmembrane protein 114
    Names
    claudin-26

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029070.2NP_083346.1  transmembrane protein 114

      See identical proteins and their annotated locations for NP_083346.1

      Status: VALIDATED

      Source sequence(s)
      AK015757
      Consensus CDS
      CCDS27937.1
      UniProtKB/Swiss-Prot
      Q9D563
      Related
      ENSMUSP00000023400.3, ENSMUST00000023400.4
      Conserved Domains (1) summary
      cl21598
      Location:20206
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      8227140..8243000 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)