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    Hem HEM-protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40462, updated on 9-Dec-2024

    Summary

    Official Symbol
    Hemprovided by FlyBase
    Official Full Name
    HEM-proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0011771
    Locus tag
    Dmel_CG5837
    See related
    AllianceGenome:FB:FBgn0011771
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5837; dhem; dhem-2; Dmel\CG5837; dNap; dNAP; HEM; Hem1; kette; Kette; Kette/Nap1; kte; l(3)03335; Nap; Nap1
    Summary
    Involved in several processes, including chaeta morphogenesis; myoblast fusion; and nervous system development. Part of SCAR complex. Is active in neuromuscular junction. Is expressed in several structures, including adult head; ganglia; germline cell; neuroblasts; and tract. Used to study developmental disorder of mental health. Human ortholog(s) of this gene implicated in immunodeficiency 72. Orthologous to several human genes including NCKAP1 (NCK associated protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See Hem in Genome Data Viewer
    Location:
    79D4-79D4; 3-47 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (22284354..22288195, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (22277454..22281295, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45960 Neighboring gene stable intronic sequence RNA 3 Neighboring gene Serine-arginine protein kinase at 79D Neighboring gene Cysteine string protein Neighboring gene Isoleucyl-tRNA synthetase Neighboring gene Tenascin major Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in axonogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cell adhesion mediated by integrin IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cell migration IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cell morphogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cell projection assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cell projection assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in central nervous system development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in chaeta morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cortical actin cytoskeleton organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cortical actin cytoskeleton organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cytoskeleton organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in myoblast fusion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in neuromuscular junction development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in neuron migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in neuron projection morphogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of cell shape IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of synapse organization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of synapse organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of SCAR complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of SCAR complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of SCAR complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    is_active_in neuromuscular junction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in neuromuscular junction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 

    General protein information

    Preferred Names
    HEM-protein
    Names
    CG5837-PA
    Hem-PA
    hemkette
    kette

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      22284354..22288195 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079490.4NP_524214.1  HEM-protein [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524214.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P55162, Q540Y5, Q9VNU8
      Related
      FBpp0078162
      Conserved Domains (1) summary
      pfam09735
      Location:121118
      Nckap1; Membrane-associated apoptosis protein