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    Kdsr 3-ketodihydrosphingosine reductase [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43043, updated on 9-Dec-2024

    Summary

    Official Symbol
    Kdsrprovided by FlyBase
    Official Full Name
    3-ketodihydrosphingosine reductaseprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039304
    Locus tag
    Dmel_CG10425
    See related
    AllianceGenome:FB:FBgn0039304
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG10425; Dmel\CG10425
    Summary
    Predicted to enable 3-dehydrosphinganine reductase activity. Predicted to be involved in 3-keto-sphinganine metabolic process and sphingolipid biosynthetic process. Predicted to be active in endoplasmic reticulum membrane. Is expressed in several structures, including Malpighian tubule primordium; adult head; embryonic epipharynx; embryonic/larval midgut primordium; and gut section. Human ortholog(s) of this gene implicated in erythrokeratodermia variabilis et progressiva 4 and follicular lymphoma. Orthologous to human KDSR (3-ketodihydrosphingosine reductase). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Kdsr in Genome Data Viewer
    Location:
    96C8-96C8; 3-87 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (25260963..25262498, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (21086685..21088220, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Nucleoporin 358kD Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR46099 Neighboring gene uncharacterized protein Neighboring gene Glutaminyl-tRNA synthetase Neighboring gene antisense RNA:CR45214 Neighboring gene RIO kinase 2

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables 3-dehydrosphinganine reductase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables 3-dehydrosphinganine reductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables 3-dehydrosphinganine reductase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in 3-keto-sphinganine metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in 3-keto-sphinganine metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sphingolipid biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in sphingolipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    3-ketodihydrosphingosine reductase
    Names
    CG10425-PA
    Kdsr-PA
    NP_651363.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      25260963..25262498 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143106.4NP_651363.1  3-ketodihydrosphingosine reductase [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651363.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VBU5
      Related
      FBpp0084241
      Conserved Domains (2) summary
      cd08939
      Location:35271
      KDSR-like_SDR_c; 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR
      pfam00106
      Location:36229
      adh_short; short chain dehydrogenase