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    CG34377 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42608, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG34377provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0263117
    Locus tag
    Dmel_CG34377
    See related
    AllianceGenome:FB:FBgn0263117
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG13858; CG13859; CG13860; CG13861; Dmel\CG34377
    Old locus tag
    CG13859; CG13860; CG13861; Dmel_CG13858; Dmel_CG13859; Dmel_CG13860; Dmel_CG13861
    Summary
    Predicted to be involved in regulation of intracellular signal transduction. Orthologous to human SAMD5 (sterile alpha motif domain containing 5). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG34377 in Genome Data Viewer
    Location:
    94A4-94A5; 3-74 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (22308663..22324094, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (18134385..18149816, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR46261 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Synergistic activation by Glass and Pointed promotes neuronal identity in the Drosophila eye disc. Wang H, et al. Nat Commun, 2024 Aug 17. PMID 39154080, Free PMC Article
    2. A single-cell atlas reveals unanticipated cell type complexity in Drosophila ovaries. Slaidina M, et al. Genome Res, 2021 Oct. PMID 34389661, Free PMC Article
    3. An expanded toolkit for Drosophila gene tagging using synthesized homology donor constructs for CRISPR-mediated homologous recombination. Kanca O, et al. Elife, 2022 Jun 20. PMID 35723254, Free PMC Article
    4. Seizure control through genetic and pharmacological manipulation of Pumilio in Drosophila: a key component of neuronal homeostasis. Lin WH, et al. Dis Model Mech, 2017 Feb 1. PMID 28067623, Free PMC Article
    5. A genome-wide resource for the analysis of protein localisation in Drosophila. Sarov M, et al. Elife, 2016 Feb 20. PMID 26896675, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of intracellular signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG34377-PA
    CG34377-PB
    CG34377-PC
    CG34377-PD
    CG34377-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      22308663..22324094 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001260307.2 → NP_001247236.1  uncharacterized protein Dmel_CG34377, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247236.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VD37
      Conserved Domains (2) summary
      smart00454
      Location:2 → 65
      SAM; Sterile alpha motif
      cl15755
      Location:5 → 65
      SAM_superfamily; SAM (Sterile alpha motif )

    2. NM_142761.4 → NP_651018.2  uncharacterized protein Dmel_CG34377, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651018.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VD37
      Conserved Domains (2) summary
      smart00454
      Location:2 → 65
      SAM; Sterile alpha motif
      cl15755
      Location:5 → 65
      SAM_superfamily; SAM (Sterile alpha motif )

    3. NM_001275901.2 → NP_001262830.1  uncharacterized protein Dmel_CG34377, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262830.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KGJ9
      Conserved Domains (2) summary
      smart00454
      Location:79 → 144
      SAM; Sterile alpha motif
      cl15755
      Location:84 → 144
      SAM_superfamily; SAM (Sterile alpha motif )

    4. NM_001316614.1 → NP_001303543.1  uncharacterized protein Dmel_CG34377, isoform E [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A126GV14
      Conserved Domains (2) summary
      smart00454
      Location:2 → 65
      SAM; Sterile alpha motif
      cl15755
      Location:5 → 65
      SAM_superfamily; SAM (Sterile alpha motif )

    5. NM_001300532.1 → NP_001287461.1  uncharacterized protein Dmel_CG34377, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287461.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VD37
      Conserved Domains (2) summary
      smart00454
      Location:2 → 65
      SAM; Sterile alpha motif
      cl15755
      Location:5 → 65
      SAM_superfamily; SAM (Sterile alpha motif )
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4KGJ9 A0A0B4KGJ9
    A0A126GV14 A0A126GV14
    Q9VD37 Q9VD37

    Gene LinkOut

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