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    bonsai bonsai [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37587, updated on 9-Dec-2024

    Summary

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    Official Symbol
    bonsaiprovided by FlyBase
    Official Full Name
    bonsaiprovided by FlyBase
    Primary source
    FLYBASE:FBgn0026261
    Locus tag
    Dmel_CG4207
    See related
    AllianceGenome:FB:FBgn0026261
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG4207; Dmel\CG4207; DmMRPS15; MRP-S15; mRpS15
    Summary
    Predicted to be a structural constituent of ribosome. Involved in regulation of growth. Located in mitochondrion. Is expressed in several structures, including adult heart; embryonic/larval midgut; embryonic/larval midgut primordium; larval muscle cell; and mesoderm. Orthologous to human MRPS15 (mitochondrial ribosomal protein S15). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See bonsai in Genome Data Viewer
    Location:
    58F3-58F3; 2-100 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (22637770..22638868)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18525275..18526373)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Cyclin-dependent kinase 9 Neighboring gene uncharacterized protein Neighboring gene Ribosomal protein S24 Neighboring gene UDP-glycosyltransferase family 317 member A1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. No influence of Indy on lifespan in Drosophila after correction for genetic and cytoplasmic background effects. Toivonen JM, et al. PLoS Genet, 2007 Jun. PMID 17571923, Free PMC Article
    2. Bonsaï, a ribosomal protein S15 homolog, involved in gut mitochondrial activity and systemic growth. Galloni M. Dev Biol, 2003 Dec 15. PMID 14651932
    3. Genetic variation for expression of the sex determination pathway genes in Drosophila melanogaster. Tarone AM, et al. Genet Res, 2005 Aug. PMID 16181521
    4. Natural variation in sugar tolerance associates with changes in signaling and mitochondrial ribosome biogenesis. Melvin RG, et al. Elife, 2018 Nov 27. PMID 30480548, Free PMC Article
    5. Energy biogenesis: one key for coordinating two genomes. Sardiello M, et al. Trends Genet, 2005 Jan. PMID 15680507

    See all (46) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Bonsai is involved in gut mitochondrial activity and systemic growth in Drosophila.
      Title: Bonsaï, a ribosomal protein S15 homolog, involved in gut mitochondrial activity and systemic growth.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial translation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in mitochondrial translation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in regulation of growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of mitochondrial small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of mitochondrial small ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    part_of mitochondrial small ribosomal subunit TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    bonsai
    Names
    CG4207-PA
    bonsai-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      22637770..22638868
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137847.3 → NP_611691.1  bonsai [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611691.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8WTC1, Q9W231
      Related
      FBpp0071771
      Conserved Domains (1) summary
      pfam00312
      Location:97 → 172
      Ribosomal_S15; Ribosomal protein S15
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8WTC1.2 Q8WTC1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Chemical Information
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