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    CG6153 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34675, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG6153provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032445
    Locus tag
    Dmel_CG6153
    See related
    AllianceGenome:FB:FBgn0032445
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    6153; Dmel\CG6153
    Summary
    Predicted to be active in nucleus. Orthologous to human PITHD1 (PITH domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG6153 in Genome Data Viewer
    Location:
    33F3-33F3; 2-47 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (12692993..12693939)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (12692993..12693939)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene POU domain protein 2 Neighboring gene Neprilysin-like 7 Neighboring gene Chaperonin containing TCP1 subunit 4 Neighboring gene Intraflagellar transport 43 Neighboring gene Protein interacting with C kinase 1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional unknomics: Systematic screening of conserved genes of unknown function. Rocha JJ, et al. PLoS Biol, 2023 Aug. PMID 37552676, Free PMC Article
    2. A network of conserved damage survival pathways revealed by a genomic RNAi screen. Ravi D, et al. PLoS Genet, 2009 Jun. PMID 19543366, Free PMC Article
    3. RIP-seq analysis of eukaryotic Sm proteins identifies three major categories of Sm-containing ribonucleoproteins. Lu Z, et al. Genome Biol, 2014 Jan 7. PMID 24393626, Free PMC Article
    4. Identification of GOLPH3 Partners in Drosophila Unveils Potential Novel Roles in Tumorigenesis and Neural Disorders. Sechi S, et al. Cells, 2021 Sep 6. PMID 34571985, Free PMC Article
    5. A genome-wide resource for the analysis of protein localisation in Drosophila. Sarov M, et al. Elife, 2016 Feb 20. PMID 26896675, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6153-PA
    CG6153-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      12692993..12693939
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001169495.2 → NP_001162966.2  uncharacterized protein Dmel_CG6153, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001162966.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7K2H3, Q9VK68
      UniProtKB/TrEMBL
      E1JHG8
      Conserved Domains (1) summary
      pfam06201
      Location:31 → 175
      PITH; PITH domain

    2. NM_135736.4 → NP_609580.1  uncharacterized protein Dmel_CG6153, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609580.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7K2H3, Q9VK68
      UniProtKB/TrEMBL
      E1JHG8
      Related
      FBpp0079975
      Conserved Domains (1) summary
      pfam06201
      Location:31 → 175
      PITH; PITH domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E1JHG8 E1JHG8
    Q9VK68.1 Q9VK68

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
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