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    GolS3 galactinol synthase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837457, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GolS3
    Official Full Name
    galactinol synthase 3
    Primary source
    TAIR:AT1G09350
    Locus tag
    AT1G09350
    See related
    Araport:AT1G09350
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtGolS3; F14J9.1; F14J9_1; galactinol synthase 3
    Summary
    Predicted to encode a galactinol synthase
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    Genomic context

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    See GolS3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (3019639..3021443)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene plant/protein (Protein of unknown function, DUF538) Neighboring gene agenet domain-containing protein Neighboring gene golgi apparatus membrane protein-like protein ECHIDNA protein Neighboring gene chloroplast RNA binding protein Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Histone occupancy-dependent and -independent removal of H3K27 trimethylation at cold-responsive genes in Arabidopsis. Kwon CS, et al. Plant J, 2009 Oct. PMID 19500304
    2. Important roles of drought- and cold-inducible genes for galactinol synthase in stress tolerance in Arabidopsis thaliana. Taji T, et al. Plant J, 2002 Feb. PMID 11846875
    3. Metabolic pathways involved in cold acclimation identified by integrated analysis of metabolites and transcripts regulated by DREB1A and DREB2A. Maruyama K, et al. Plant Physiol, 2009 Aug. PMID 19502356, Free PMC Article
    4. Galactinol and raffinose constitute a novel function to protect plants from oxidative damage. Nishizawa A, et al. Plant Physiol, 2008 Jul. PMID 18502973, Free PMC Article
    5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Trimethylation of histone H3 at lysine 27 decreases at COR15A and ATGOLS3 during cold-induced transcription.
      Title: Histone occupancy-dependent and -independent removal of H3K27 trimethylation at cold-responsive genes in Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001331831.1
    NM_100805.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables inositol 3-alpha-galactosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables inositol 3-alpha-galactosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in galactose metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within response to cold IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to cold IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to oxidative stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    galactinol synthase 3
    NP_172406.1
    • galactinol synthase 3 (GolS3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1260 Blast hits to 1259 proteins in 288 species: Archae - 0; Bacteria - 98; Metazoa - 258; Fungi - 282; Plants - 479; Viruses - 73; Other Eukaryotes - 70 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3019639..3021443
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100805.2 → NP_172406.1  galactinol synthase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172406.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80518
      UniProtKB/TrEMBL
      A0A5S9TF89, A0A654E850, W8PVD7
      Conserved Domains (1) summary
      PLN00176
      Location:1 → 334
      PLN00176; galactinol synthase

    2. NM_001331831.1 → NP_001320559.1  galactinol synthase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AN71
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O80518.1

    Gene LinkOut

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