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    alpha 1,4-glycosyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818393, updated on 18-Sep-2024

    Summary

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    Official Full Name
    alpha 1,4-glycosyltransferase family protein
    Primary source
    TAIR:AT2G38150
    Locus tag
    AT2G38150
    See related
    Araport:AT2G38150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F16M14.8; F16M14_8
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (15981625..15982917, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Acyl-CoA N-acyltransferases (NAT) superfamily protein Neighboring gene plastid-specific ribosomal protein 4 Neighboring gene alpha 1,4-glycosyltransferase family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    alpha 1,4-glycosyltransferase family protein
    NP_181350.2
    • alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, Golgi stack; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT5G01250.1); Has 454 Blast hits to 450 proteins in 114 species: Archae - 0; Bacteria - 88; Metazoa - 237; Fungi - 18; Plants - 94; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15981625..15982917 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129371.3 → NP_181350.2  alpha 1,4-glycosyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181350.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VYJ6, A0A5S9X513, F4IS00
      Conserved Domains (2) summary
      pfam04488
      Location:135 → 257
      Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
      pfam04572
      Location:279 → 397
      Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    Nucleotide Protein
    Heading Accession and Version

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