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    SKS1 SKU5 similar 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828627, updated on 18-Sep-2024

    Summary

    Official Symbol
    SKS1
    Official Full Name
    SKU5 similar 1
    Primary source
    TAIR:AT4G25240
    Locus tag
    AT4G25240
    See related
    Araport:AT4G25240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24A6.80; F24A6_80; SKU5 similar 1
    Summary
    Encodes GPI-anchored SKU5-like protein.
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    Genomic context

    See SKS1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    10
    Sequence:
    Chromosome: 4; NC_003075.7 (12930231..12933895)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene RPM1 interacting protein 2 Neighboring gene miscRNA Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

    Interactions

    General gene information

    NM_001341725.1
    NM_118656.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables copper ion binding  
    enables oxidoreductase activity  

    General protein information

    Preferred Names
    SKU5 similar 1
    NP_001320060.1
    • SKU5 similar 1 (SKS1); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1); Has 5221 Blast hits to 5195 proteins in 927 species: Archae - 4; Bacteria - 1535; Metazoa - 283; Fungi - 1954; Plants - 1280; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12930231..12933895
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001341725.1 → NP_001320060.1  SKU5 similar 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8VXX5, Q9SB39
      UniProtKB/TrEMBL
      A0A178UTC9, A0A654FSP5
      Conserved Domains (1) summary
      PLN00044
      Location:15 → 562
      PLN00044; multi-copper oxidase-related protein; Provisional
    2. NM_118656.5 → NP_194254.2  SKU5 similar 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194254.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8VXX5, Q9SB39
      UniProtKB/TrEMBL
      A0A178UTC9, A0A654FSP5
      Conserved Domains (1) summary
      PLN00044
      Location:15 → 562
      PLN00044; multi-copper oxidase-related protein; Provisional
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