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    HSP23.6-MITO mitochondrion-localized small heat shock protein 23.6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828623, updated on 18-Sep-2024

    Summary

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    Official Symbol
    HSP23.6-MITO
    Official Full Name
    mitochondrion-localized small heat shock protein 23.6
    Primary source
    TAIR:AT4G25200
    Locus tag
    AT4G25200
    See related
    Araport:AT4G25200
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATHSP23.6-MITO; F24A6.40; F24A6_40; mitochondrion-localized small heat shock protein 23.6; SMALL HEAT SHOCK PROTEIN 23.6
    Summary
    AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrial
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    Genomic context

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    See HSP23.6-MITO in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (12916926..12918110)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene RNA polymerase III RPC4 Neighboring gene ncRNA Neighboring gene QWRF motif protein (DUF566) Neighboring gene DNA-binding storekeeper protein-related transcriptional regulator Neighboring gene root hair specific 15

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The recent evolution of a pseudogene: diversity and divergence of a mitochondria-localized small heat shock protein in Arabidopsis thaliana. Waters ER, et al. Genome, 2008 Mar. PMID 18356953
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. evolution of a pseudogene: diversity and divergence of HSP23.6
      Title: The recent evolution of a pseudogene: diversity and divergence of a mitochondria-localized small heat shock protein in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_118652.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    mitochondrion-localized small heat shock protein 23.6
    NP_194250.1
    • mitochondrion-localized small heat shock protein 23.6 (HSP23.6-MITO); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, response to heat; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G51440.1); Has 4365 Blast hits to 4365 proteins in 1128 species: Archae - 166; Bacteria - 2413; Metazoa - 2; Fungi - 150; Plants - 1316; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12916926..12918110
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118652.3 → NP_194250.1  mitochondrion-localized small heat shock protein 23.6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194250.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O23640, Q541V4, Q96331, Q9SAN6
      UniProtKB/TrEMBL
      A0A178USN5, A0A5S9XVN4
      Conserved Domains (1) summary
      cd06464
      Location:110 → 195
      ACD_sHsps-like; Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q96331.1

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