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    RLP45 receptor like protein 45 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824491, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RLP45
    Official Full Name
    receptor like protein 45
    Primary source
    TAIR:AT3G53240
    Locus tag
    AT3G53240
    See related
    Araport:AT3G53240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtRLP45; receptor like protein 45
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    Genomic context

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    See RLP45 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (19733766..19739232)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ATPase, AAA-type, CDC48 protein Neighboring gene ROTUNDIFOLIA like 1 Neighboring gene uncharacterized protein Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene phenylalanine ammonia-lyase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001339602.1
    NM_001339603.1
    NM_115184.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within signal transduction IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    receptor like protein 45
    NP_190892.3
    • receptor like protein 45 (RLP45); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 15 (TAIR:AT1G74190.1); Has 114871 Blast hits to 27541 proteins in 1042 species: Archae - 49; Bacteria - 7290; Metazoa - 23394; Fungi - 1166; Plants - 74458; Viruses - 12; Other Eukaryotes - 8502 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19733766..19739232
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115184.5 → NP_190892.3  receptor like protein 45 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190892.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2ETF1
      Conserved Domains (3) summary
      cd00116
      Location:129 → 385
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:350 → 374
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:707 → 762
      LRR_8; Leucine rich repeat

    2. NM_001339602.1 → NP_001325565.1  receptor like protein 45 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LLM1, A0A5S9XM32, A0A654FFD2

    3. NM_001339603.1 → NP_001325566.1  receptor like protein 45 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2ETF1
    Nucleotide Protein
    Heading Accession and Version

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