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    RNA methyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836536, updated on 18-Sep-2024

    Summary

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    Official Full Name
    RNA methyltransferase family protein
    Primary source
    TAIR:AT5G64150
    Locus tag
    AT5G64150
    See related
    Araport:AT5G64150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MHJ24.13; MHJ24_13
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (25668755..25671218, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Peroxidase superfamily protein Neighboring gene cAMP-regulated phosphoprotein 19-related protein Neighboring gene ribosomal protein S28 Neighboring gene ncRNA Neighboring gene plant/protein Neighboring gene dentin sialophosphoprotein-like protein Neighboring gene tropomyosin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_125811.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    RNA methyltransferase family protein
    NP_201220.1
    • RNA methyltransferase family protein; FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity, catalytic activity, nucleic acid binding; INVOLVED IN: methylation, protein amino acid methylation; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase small (InterPro:IPR007848), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), Modification methylase HemK (InterPro:IPR004556); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25668755..25671218 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125811.4 → NP_201220.1  RNA methyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201220.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UHD8, A0A654GDW5, Q9FMI5
      Conserved Domains (1) summary
      PRK09328
      Location:121 → 374
      PRK09328; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional
    Nucleotide Protein
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