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    C10orf126 chromosome 10 open reading frame 126 [ Homo sapiens (human) ]

    Gene ID: 283080, updated on 10-Dec-2024

    Summary

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    Official Symbol
    C10orf126provided by HGNC
    Official Full Name
    chromosome 10 open reading frame 126provided by HGNC
    Primary source
    HGNC:HGNC:28693
    See related
    Ensembl:ENSG00000232624 AllianceGenome:HGNC:28693
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    bA492M23.1
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    all
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    Genomic context

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    See C10orf126 in Genome Data Viewer
    Location:
    10p12.1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (28846408..28881898)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (28878333..28913800)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (29135337..29170827)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1517 Neighboring gene RNA, U6 small nuclear 270, pseudogene Neighboring gene long intergenic non-protein coding RNA 837 Neighboring gene heart enhancer 23 Neighboring gene RNA, 5S ribosomal pseudogene 308 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr10:29194458-29195657 Neighboring gene ribosomal protein L21 pseudogene 93 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:29214143-29214841 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:29274071-29275270 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:29279785-29280984 Neighboring gene NANOG hESC enhancer GRCh37_chr10:29299789-29300329 Neighboring gene uncharacterized LOC107984174

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    Related articles in PubMed

    1. The sequence of the human genome. Venter JC, et al. Science, 2001 Feb 16. PMID 11181995
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Homology

    Clone Names

    • MGC45541

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_164114.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL390248
      Related
      ENST00000375520.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      28846408..28881898
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      28878333..28913800
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001278522.1: Suppressed sequence

      Description
      NM_001278522.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.

    2. NM_173577.1: Suppressed sequence

      Description
      NM_173577.1: This RefSeq record was removed by NCBI staff. Contact [email protected] for further information.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8N4M7.2 GenPept UniProtKB/Swiss-Prot:Q8N4M7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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