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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838248, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT1G16770
    Locus tag
    AT1G16770
    See related
    Araport:AT1G16770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17F16.12; F17F16_12
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (5737839..5739377)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene kinase with adenine nucleotide alpha hydrolases-like domain-containing protein Neighboring gene Inorganic H pyrophosphatase family protein Neighboring gene ribosomal protein-like protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene 7-dehydrocholesterol reductase-like protein Neighboring gene vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001084079.2
    NM_001332257.1
    NM_101538.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001077548.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 103 Blast hits to 103 proteins in 50 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 65; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    NP_173121.1
    • unknown protein; Has 109 Blast hits to 109 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 71; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5737839..5739377
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001084079.2 → NP_001077548.1  uncharacterized protein AT1G16770 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077548.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9URK6, A0A654EBI0, Q45GQ0

    2. NM_101538.2 → NP_173121.1  uncharacterized protein AT1G16770 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173121.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9URK6, A0A654EBI0, Q9FWR1

    3. NM_001332257.1 → NP_001321384.1  uncharacterized protein AT1G16770 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AQP5
    Nucleotide Protein
    Heading Accession and Version

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