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    DHHC-type zinc finger family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826193, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DHHC-type zinc finger family protein
    Primary source
    TAIR:AT4G00840
    Locus tag
    AT4G00840
    See related
    Araport:AT4G00840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    A_TM018A10.8; A_TM018A10_8; T18A10.14; T18A10_14
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (355211..357296, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene 60S acidic ribosomal protein family Neighboring gene IQ-domain 17 Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene GRF1-interacting factor 3 Neighboring gene monopolar spindle protein (DUF1138) Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001340271.1
    NM_116310.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein-cysteine S-palmitoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DHHC-type zinc finger family protein
    NP_567193.2
    • DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      355211..357296 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116310.5 → NP_567193.2  DHHC-type zinc finger family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567193.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O23092, Q5M757
      UniProtKB/TrEMBL
      A0A178UV61, A0A654FKZ1
      Conserved Domains (1) summary
      cl19890
      Location:4 → 266
      zf-DHHC; DHHC palmitoyltransferase

    2. NM_001340271.1 → NP_001329082.1  DHHC-type zinc finger family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B6M5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5M757.1

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