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    Peroxidase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818419, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Peroxidase superfamily protein
    Primary source
    TAIR:AT2G38380
    Locus tag
    AT2G38380
    See related
    Araport:AT2G38380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T19C21.13; T19C21_13
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (16076289..16078781)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene prenylated RAB acceptor 1.B4 Neighboring gene endonuclease/glycosyl hydrolase Neighboring gene weak chloroplast movement under blue light protein (DUF827) Neighboring gene Peroxidase superfamily protein Neighboring gene alanine:glyoxylate aminotransferase 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of zinc-responsive proteins in the roots of Arabidopsis thaliana using a highly improved method of two-dimensional electrophoresis. Fukao Y, et al. Plant Cell Physiol, 2009 Dec. PMID 19880396
    2. Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics. Bellati J, et al. Mol Cell Proteomics, 2016 Nov. PMID 27609422, Free PMC Article
    3. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_129394.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables lactoperoxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to zinc ion IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in secretory vesicle HDA PubMed 

    General protein information

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    Preferred Names
    Peroxidase superfamily protein
    NP_181372.1
    • Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to zinc ion, response to salt stress; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G38390.1); Has 4386 Blast hits to 4361 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 86; Plants - 4250; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      16076289..16078781
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129394.3 → NP_181372.1  Peroxidase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181372.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80913, P24102
      UniProtKB/TrEMBL
      A0A178VXE4, A0A384L8X8, Q0WLG9
      Conserved Domains (1) summary
      cd00693
      Location:30 → 332
      secretory_peroxidase; Horseradish peroxidase and related secretory plant peroxidases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P24102.2

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