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    WRKY60 WRKY DNA-binding protein 60 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817039, updated on 18-Sep-2024

    Summary

    Official Symbol
    WRKY60
    Official Full Name
    WRKY DNA-binding protein 60
    Primary source
    TAIR:AT2G25000
    Locus tag
    AT2G25000
    See related
    Araport:AT2G25000
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATWRKY60; F27C12.8; F27C12_8; WRKY DNA-binding protein 60
    Summary
    Pathogen-induced transcription factor. Forms protein complexes with itself and with WRKY40. Coexpression with WRKY18 or WRKY40 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.
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    Genomic context

    See WRKY60 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (10629662..10631413)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Proline-rich extensin-like family protein Neighboring gene Serine/threonine-protein kinase Rio1 Neighboring gene Aminotransferase-like, plant mobile domain family protein Neighboring gene miscRNA Neighboring gene ncRNA

    Bibliography

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001335969.1
    NM_001335970.1
    NM_128058.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    WRKY DNA-binding protein 60
    NP_180072.1
    • WRKY DNA-binding protein 60 (WRKY60); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.1); Has 3263 Blast hits to 2826 proteins in 197 species: Archae - 14; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3232; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10629662..10631413
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335968.1NP_001325298.1  WRKY DNA-binding protein 60 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W1P0, A0A1P8B2U6, A0A5S9X0X9, Q8LBV3
    2. NM_128058.4NP_180072.1  WRKY DNA-binding protein 60 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180072.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8VWV4, Q9SK33
      UniProtKB/TrEMBL
      A0A178W1P0, A0A5S9X0X9, A0A654F0W8, Q0WSE5, Q8LBV3
      Conserved Domains (1) summary
      smart00774
      Location:145203
      WRKY; DNA binding domain
    3. NM_001335969.1NP_001325299.1  WRKY DNA-binding protein 60 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W1P0, A0A1P8B2R2, A0A5S9X0X9, Q8LBV3
    4. NM_001335970.1NP_001325297.1  WRKY DNA-binding protein 60 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W1P0, A0A1P8B2U6, A0A5S9X0X9, Q8LBV3