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    ATP-dependent protease La (LON) domain protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817117, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ATP-dependent protease La (LON) domain protein
    Primary source
    TAIR:AT2G25740
    Locus tag
    AT2G25740
    See related
    Araport:AT2G25740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3N11.21
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    9
    Sequence:
    Chromosome: 2; NC_003071.7 (10980122..10984128)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Sulfite exporter TauE/SafE family protein Neighboring gene Protein kinase family protein Neighboring gene Polyketide cyclase/dehydrase and lipid transport superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_179738.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ATP-dependent protease La (LON) domain protein
    NP_850069.1
    • ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); Has 2345 Blast hits to 2258 proteins in 710 species: Archae - 0; Bacteria - 1319; Metazoa - 281; Fungi - 6; Plants - 99; Viruses - 0; Other Eukaryotes - 640 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10980122..10984128
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336020.1 → NP_001323610.1  ATP-dependent protease La (LON) domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VND5, A0A1P8AXJ7
      Conserved Domains (3) summary
      cd15777
      Location:377 → 477
      CRBN_C_like; Thalidomide-binding C-terminal domain of cereblon (CRBN) and similar protein domains
      cl19481
      Location:332 → 370
      LON; Found in ATP-dependent protease La (LON)
      pfam02190
      Location:33 → 168
      LON_substr_bdg; ATP-dependent protease La (LON) substrate-binding domain

    2. NM_179738.5 → NP_850069.1  ATP-dependent protease La (LON) domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850069.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EW58, Q5E916, Q8VXV2
      Conserved Domains (3) summary
      cd15777
      Location:442 → 542
      CRBN_C_like; Thalidomide-binding C-terminal domain of cereblon (CRBN) and similar protein domains
      cl19481
      Location:397 → 435
      LON; Found in ATP-dependent protease La (LON)
      pfam02190
      Location:98 → 233
      LON_substr_bdg; ATP-dependent protease La (LON) substrate-binding domain
    Nucleotide Protein
    Heading Accession and Version

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