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    emb1513 copper ion transmembrane transporter [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818368, updated on 18-Sep-2024

    Summary

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    Official Symbol
    emb1513
    Official Full Name
    copper ion transmembrane transporter
    Primary source
    TAIR:AT2G37920
    Locus tag
    AT2G37920
    See related
    Araport:AT2G37920
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    embryo defective 1513; T8P21.17; T8P21_17
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    Genomic context

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    See emb1513 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (15868340..15870071, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Major facilitator superfamily protein Neighboring gene ncRNA Neighboring gene cation/hydrogen exchanger, putative (CHX21) Neighboring gene copper transporter 4 Neighboring gene hypothetical protein (DUF3527)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Bach-Pages M, et al. Biomolecules, 2020 Apr 24. PMID 32344669, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_129348.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables copper ion transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables mRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy NAS
    Non-traceable Author Statement
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    copper ion transmembrane transporter
    NP_565874.1
    • embryo defective 1513 (emb1513); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G07750.1); Has 60 Blast hits to 60 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15868340..15870071 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129348.4 → NP_565874.1  copper ion transmembrane transporter [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565874.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EZT7, Q8LG21, Q8RWC2
    Nucleotide Protein
    Heading Accession and Version

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