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    Serine protease inhibitor (SERPIN) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842513, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Serine protease inhibitor (SERPIN) family protein
    Primary source
    TAIR:AT1G62170
    Locus tag
    AT1G62170
    See related
    Araport:AT1G62170
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19K23.10; F19K23_10
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (22973840..22975754)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Mitochondrial transcription termination factor family protein Neighboring gene Serine protease inhibitor (SERPIN) family protein Neighboring gene ncRNA Neighboring gene 5'adenylylphosphosulfate reductase 2 Neighboring gene Kua-ubiquitin conjugating enzyme hybrid localization domain-containing protein Neighboring gene Major facilitator superfamily protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteomic profiling of tandem affinity purified 14-3-3 protein complexes in Arabidopsis thaliana. Chang IF, et al. Proteomics, 2009 Jun. PMID 19452453, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables serine-type endopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serine protease inhibitor (SERPIN) family protein
    NP_001185292.1
    • Serine protease inhibitor (SERPIN) family protein; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: serpin 2 (TAIR:AT2G14540.1).
    NP_176408.1
    • Serine protease inhibitor (SERPIN) family protein; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: serpin 2 (TAIR:AT2G14540.1); Has 6160 Blast hits to 6124 proteins in 462 species: Archae - 64; Bacteria - 366; Metazoa - 4705; Fungi - 11; Plants - 344; Viruses - 456; Other Eukaryotes - 214 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      22973840..22975754
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001198363.1 → NP_001185292.1  Serine protease inhibitor (SERPIN) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185292.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WRR0, F4HX48
      Conserved Domains (1) summary
      cl00137
      Location:69 → 464
      SERPIN; SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate ...

    2. NM_104898.1 → NP_176408.1  Serine protease inhibitor (SERPIN) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176408.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O04582
      UniProtKB/TrEMBL
      A0A5S9WRR0, A0A654EKP1
      Conserved Domains (1) summary
      cd02043
      Location:69 → 431
      serpinP_plants; serpin family P, plant serpins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O04582.2

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