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    extra-large G-like protein, putative (DUF3133) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819246, updated on 18-Sep-2024

    Summary

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    Official Full Name
    extra-large G-like protein, putative (DUF3133)
    Primary source
    TAIR:AT2G46380
    Locus tag
    AT2G46380
    See related
    Araport:AT2G46380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F11C10.7
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (19039024..19042348)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Auxin-responsive GH3 family protein Neighboring gene uncharacterized protein Neighboring gene succinate dehydrogenase subunit Neighboring gene WRKY DNA-binding protein 46 Neighboring gene Homeodomain-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001337189.1
    NM_130202.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of defense response to fungus IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    extra-large G-like protein, putative (DUF3133)
    NP_182161.3
    • Protein of unknown function (DUF3133); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT3G61670.1); Has 300 Blast hits to 240 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19039024..19042348
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130202.4 → NP_182161.3  extra-large G-like protein, putative (DUF3133) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182161.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W1W9, A0A7G2EKF2, Q0WVG1
      Conserved Domains (1) summary
      pfam11331
      Location:382 → 426
      zinc_ribbon_12; Probable zinc-ribbon domain

    2. NM_001337189.1 → NP_001324868.1  extra-large G-like protein, putative (DUF3133) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B1E9, A0A7G2EKF2
    Nucleotide Protein
    Heading Accession and Version

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