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    DHNAT1 Thioesterase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841252, updated on 18-Sep-2024

    Summary

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    Official Symbol
    DHNAT1
    Official Full Name
    Thioesterase superfamily protein
    Primary source
    TAIR:AT1G48320
    Locus tag
    AT1G48320
    See related
    Araport:AT1G48320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DHNA-CoA thioesterase 1; F11A17.13; F11A17_13
    Summary
    Encodes one of the two functional DHNA-CoA (1,4-dihydroxy-2-naphthoyl-CoA) thioesterases found in Arabidopsis.
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    Genomic context

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    See DHNAT1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (17854813..17855715, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene diacylglycerol acyltransferase Neighboring gene chromatin remodeling factor18 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene SsrA-binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional convergence of structurally distinct thioesterases from cyanobacteria and plants involved in phylloquinone biosynthesis. Furt F, et al. Acta Crystallogr D Biol Crystallogr, 2013 Oct. PMID 24100308, Free PMC Article
    2. Phylloquinone (vitamin K(1) ) biosynthesis in plants: two peroxisomal thioesterases of Lactobacillales origin hydrolyze 1,4-dihydroxy-2-naphthoyl-CoA. Widhalm JR, et al. Plant J, 2012 Jul. PMID 22372525
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. AtDHNAT1 (AT1G48320) and AtDHNAT2 (AT5G48950) participate in phylloquinone biosynthesis in Arabidopsis.
      Title: Phylloquinone (vitamin K(1) ) biosynthesis in plants: two peroxisomal thioesterases of Lactobacillales origin hydrolyze 1,4-dihydroxy-2-naphthoyl-CoA.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_103729.3

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in phylloquinone biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within phylloquinone biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein homotetramerization IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in peroxisome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Thioesterase superfamily protein
    NP_175266.1
    • Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683), Phenylacetic acid degradation-related protein (InterPro:IPR003736); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT5G48950.1); Has 2845 Blast hits to 2845 proteins in 1040 species: Archae - 0; Bacteria - 2337; Metazoa - 4; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      17854813..17855715 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103729.3 → NP_175266.1  Thioesterase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175266.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SX65
      UniProtKB/TrEMBL
      A0A178WIC5, A0A5S9WMP3, A0A654EGR6
      Conserved Domains (1) summary
      PLN02322
      Location:3 → 156
      PLN02322; acyl-CoA thioesterase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SX65.1

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