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    PATL2 PATELLIN 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838859, updated on 18-Sep-2024

    Summary

    Official Symbol
    PATL2
    Official Full Name
    PATELLIN 2
    Primary source
    TAIR:AT1G22530
    Locus tag
    AT1G22530
    See related
    Araport:AT1G22530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12K8.13; F12K8_13; PATELLIN 2
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    Genomic context

    See PATL2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (7955445..7958564, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) Neighboring gene ncRNA Neighboring gene MICOS complex subunit Mic10-like protein (DUF543) Neighboring gene Major facilitator superfamily protein Neighboring gene Major facilitator superfamily protein

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    General gene information

    NM_001332551.1
    NM_102102.3

    Gene Ontology Provided by TAIR

    General protein information

    Preferred Names
    PATELLIN 2
    NP_173669.1
    • PATELLIN 2 (PATL2); FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: PATELLIN 1 (TAIR:AT1G72150.1); Has 61558 Blast hits to 35948 proteins in 2575 species: Archae - 235; Bacteria - 13717; Metazoa - 20974; Fungi - 8097; Plants - 3493; Viruses - 317; Other Eukaryotes - 14725 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7955445..7958564 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102102.3 → NP_173669.1  PATELLIN 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173669.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56ZI2, Q9SK94
      UniProtKB/TrEMBL
      A0A178WBS6
      Conserved Domains (2) summary
      smart01100
      Location:357 → 389
      CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
      cd00170
      Location:410 → 571
      SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
    2. NM_001332551.1 → NP_001320685.1  PATELLIN 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WBS6, A0A1P8ANK1
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