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    ADF11 actin depolymerizing factor 11 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839281, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ADF11
    Official Full Name
    actin depolymerizing factor 11
    Primary source
    TAIR:AT1G01750
    Locus tag
    AT1G01750
    See related
    Araport:AT1G01750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    actin depolymerizing factor 11; T1N6.16; T1N6_16
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    Genomic context

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    See ADF11 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (275188..276310)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene adenylosuccinate synthetase Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene kinase with tetratricopeptide repeat domain-containing protein Neighboring gene ncRNA Neighboring gene denosine deaminases acting on tRNA Neighboring gene ncRNA Neighboring gene propionyl-CoA carboxylase Neighboring gene GATA type zinc finger transcription factor family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plant Actin-Depolymerizing Factors Possess Opposing Biochemical Properties Arising from Key Amino Acid Changes throughout Evolution. Nan Q, et al. Plant Cell, 2017 Feb. PMID 28123105, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001331303.1
    NM_100058.2

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    acts_upstream_of_or_within actin filament depolymerization IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in actin filament depolymerization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    actin depolymerizing factor 11
    NP_171680.1
    • actin depolymerizing factor 11 (ADF11); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 8 (TAIR:AT4G00680.1); Has 1654 Blast hits to 1631 proteins in 274 species: Archae - 0; Bacteria - 5; Metazoa - 781; Fungi - 163; Plants - 515; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      275188..276310
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100058.2 → NP_171680.1  actin depolymerizing factor 11 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171680.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LQ81
      UniProtKB/TrEMBL
      A0A178WJX4, A0A178WLU6, A0A5S9S4M6
      Conserved Domains (1) summary
      cl15697
      Location:4 → 137
      ADF_gelsolin; Actin depolymerization factor/cofilin- and gelsolin-like domains

    2. NM_001331303.1 → NP_001320442.1  actin depolymerizing factor 11 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLU6, A0A1P8AMT9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LQ81.1

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