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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839737, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT1G28395
    Locus tag
    AT1G28395
    See related
    Araport:AT1G28395
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (9969246..9971681, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene MAC/Perforin domain-containing protein Neighboring gene Protein kinase superfamily protein Neighboring gene ncRNA Neighboring gene GATA zinc finger protein Neighboring gene myosin heavy chain-like protein Neighboring gene homeobox-1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. In-depth temporal transcriptome profiling reveals a crucial developmental switch with roles for RNA processing and organelle metabolism that are essential for germination in Arabidopsis. Narsai R, et al. Plant Physiol, 2011 Nov. PMID 21908688, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001123900.2
    NM_102607.2
    NM_179391.4
    NM_202199.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001117372.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001185107.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1).
    NP_564308.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_849722.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_973928.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      9969246..9971681 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001198178.2 → NP_001185107.1  uncharacterized protein AT1G28395 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185107.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WM11, F4HWM1

    2. NM_001332813.1 → NP_001320958.1  uncharacterized protein AT1G28395 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WNU3, A0A384LP37, B3H530

    3. NM_001123900.2 → NP_001117372.1  uncharacterized protein AT1G28395 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001117372.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WNU3, A0A384LP37, B3H530

    4. NM_202199.2 → NP_973928.1  uncharacterized protein AT1G28395 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973928.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WNU6, Q8LEQ7

    5. NM_102607.2 → NP_564308.1  uncharacterized protein AT1G28395 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564308.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WNU6, Q8LEQ7

    6. NM_179391.4 → NP_849722.1  uncharacterized protein AT1G28395 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849722.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WNU6, Q8LEQ7
    Nucleotide Protein
    Heading Accession and Version

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