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    RKL1 receptor-like kinase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841269, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RKL1
    Official Full Name
    receptor-like kinase 1
    Primary source
    TAIR:AT1G48480
    Locus tag
    AT1G48480
    See related
    Araport:AT1G48480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    receptor-like kinase 1; T1N15.9; T1N15_9
    Summary
    Arabidopsis thaliana receptor-like protein kinase (RKL1) gene
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    Genomic context

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    See RKL1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (17918207..17921116)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene tRNA-processing ribonuclease BN Neighboring gene ncRNA Neighboring gene glutamine synthetase 1;5 Neighboring gene Protein kinase superfamily protein Neighboring gene jasmonate-zim-domain protein 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of three clones which commonly interact with the kinase domains of highly homologous two receptor-like kinases, RLK902 and RKL1. Tarutani Y, et al. Biosci Biotechnol Biochem, 2004 Dec. PMID 15618630
    2. Study of natural diversity in response to a key pathogenicity regulator of Ralstonia solanacearum reveals new susceptibility genes in Arabidopsis thaliana. Demirjian C, et al. Mol Plant Pathol, 2022 Mar. PMID 34939305, Free PMC Article
    3. Members of the Plant CRK Superfamily Are Capable of Trans- and Autophosphorylation of Tyrosine Residues. Nemoto K, et al. J Biol Chem, 2015 Jul 3. PMID 25969537, Free PMC Article
    4. An extracellular network of Arabidopsis leucine-rich repeat receptor kinases. Smakowska-Luzan E, et al. Nature, 2018 Jan 18. PMID 29320478, Free PMC Article
    5. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_103744.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in defense response to bacterium IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus HDA PubMed 
    located_in plant-type vacuole HDA PubMed 
    located_in plasma membrane HDA PubMed 
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    receptor-like kinase 1
    NP_564528.1
    • receptor-like kinase 1 (RKL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: receptor-like kinase 902 (TAIR:AT3G17840.1); Has 150712 Blast hits to 111636 proteins in 3789 species: Archae - 114; Bacteria - 11711; Metazoa - 42617; Fungi - 8101; Plants - 71209; Viruses - 324; Other Eukaryotes - 16636 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      17918207..17921116
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103744.2 → NP_564528.1  receptor-like kinase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564528.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9DHQ4, Q9LP77, Q9ZT08
      UniProtKB/TrEMBL
      A0A178WLI2, A0A5S9WKJ5, B5X571
      Conserved Domains (5) summary
      smart00221
      Location:375 → 639
      STYKc; Protein kinase; unclassified specificity
      cd14066
      Location:377 → 642
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      sd00033
      Location:99 → 122
      LRR_RI; leucine-rich repeat [structural motif]
      pfam08263
      Location:33 → 69
      LRRNT_2; Leucine rich repeat N-terminal domain
      pfam13855
      Location:121 → 181
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LP77.1

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