SHW1 short hypocotyl in white light1 [Arabidopsis thaliana (thale cress)] - Gene

Summary

Official Symbol: SHW1
Official Full Name: short hypocotyl in white light1
Primary source: TAIR:AT1G69935
Locus tag: AT1G69935
See related: Araport:AT1G69935
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: SHORT HYPOCOTYL IN WHITE LIGHT1
Summary: Encodes a nuclear localized serine-arginine-aspartate-rich protein that acts as a negative regulator of photomorphogenesis.
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Chromosome 1 - NC_003070.9 Genomic Context describing neighboring genes

Go to nucleotide: Graphics FASTA GenBank

Data indicate a coordinated regulation of Arabidopsis proteins SHW1, COP1, and HY5 in seedling development.
Title: Short Hypocotyl in White Light1 Interacts with Elongated Hypocotyl5 (HY5) and Constitutive Photomorphogenic1 (COP1) and Promotes COP1-Mediated Degradation of HY5 during Arabidopsis Seedling Development.
SHW1 acts as a negative regulator of light-mediated inhibition of hypocotyl elongation, however, plays a positive regulatory role in light-regulated gene expression. It acts nonredundantly with COP1 to control hypocotyl elongation in the darkness. [SHW1]
Title: SHORT HYPOCOTYL IN WHITE LIGHT1, a serine-arginine-aspartate-rich protein in Arabidopsis, acts as a negative regulator of photomorphogenic growth.

Submit: New GeneRIF Correction

Products	Interactant	Other Gene	Complex	Source	Pubs	Description

NM_001334430.1

NM_105662.2

Function	Evidence Code	Pubs
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
involved_in negative regulation of photomorphogenesis	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within negative regulation of photomorphogenesis	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in negative regulation of photomorphogenesis	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in positive gravitropism	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in positive regulation of lateral root development	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in positive regulation of long-day photoperiodism, flowering	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in regulation of abscisic acid-activated signaling pathway	IEA Inferred from Electronic Annotation more info
involved_in regulation of abscisic acid-activated signaling pathway	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in regulation of anthocyanin biosynthetic process	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in regulation of chlorophyll biosynthetic process	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in regulation of red or far-red light signaling pathway	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in response to light intensity	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in response to light stimulus	IEP Inferred from Expression Pattern more info	PubMed
involved_in response to light stimulus	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info
located_in mitochondrion	ISM Inferred from Sequence Model more info
located_in nucleus	IDA Inferred from Direct Assay more info	PubMed

NP_564981.1

SHORT HYPOCOTYL IN WHITE LIGHT1 (SHW1); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33780.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).