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    iPGAM2 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820006, updated on 18-Sep-2024

    Summary

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    Official Symbol
    iPGAM2
    Official Full Name
    Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
    Primary source
    TAIR:AT3G08590
    Locus tag
    AT3G08590
    See related
    Araport:AT3G08590
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    2; 3-biphosphoglycerate-independent phosphoglycerate mutase 2
    Summary
    Encodes a 2,3-biphosphoglycerate-independent phosphoglycerate mutase that is involved in pollen development and stomatal movement.
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    Genomic context

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    See iPGAM2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (2608308..2611555, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Phototropic-responsive NPH3 family protein Neighboring gene ADP/ATP carrier 1 Neighboring gene transmembrane protein, putative (DUF1191) Neighboring gene NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The glycolytic enzyme, phosphoglycerate mutase, has critical roles in stomatal movement, vegetative growth, and pollen production in Arabidopsis thaliana. Zhao Z, et al. J Exp Bot, 2011 Oct. PMID 21813794, Free PMC Article
    2. Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. Bindschedler LV, et al. Phytochemistry, 2008 Jul. PMID 18538804
    3. Proteomic analysis of the 26S proteasome reveals its direct interaction with transit peptides of plastid protein precursors for their degradation. Sako K, et al. J Proteome Res, 2014 Jul 3. PMID 24846764
    4. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    5. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. At1g09780 and At3g08590 has critical roles in stomatal movement, vegetative growth, and pollen production.
      Title: The glycolytic enzyme, phosphoglycerate mutase, has critical roles in stomatal movement, vegetative growth, and pollen production in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_111693.3
    NM_180211.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables manganese ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in glucose catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in glycolytic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within pollen development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in pollen development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in response to abscisic acid IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in response to blue light IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in response to carbon dioxide IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within stomatal movement IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in stomatal movement IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apoplast HDA PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
    NP_187471.1
    • Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; FUNCTIONS IN: manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Metalloenzyme (InterPro:IPR006124), BPG-independent PGAM, N-terminal (InterPro:IPR011258), Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (InterPro:IPR005995), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (TAIR:AT1G09780.1); Has 4794 Blast hits to 4787 proteins in 1681 species: Archae - 54; Bacteria - 3006; Metazoa - 34; Fungi - 85; Plants - 379; Viruses - 0; Other Eukaryotes - 1236 (source: NCBI BLink).
    NP_850542.1
    • Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; FUNCTIONS IN: manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), BPG-independent PGAM, N-terminal (InterPro:IPR011258), Metalloenzyme (InterPro:IPR006124), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (InterPro:IPR005995); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (TAIR:AT1G09780.1); Has 4794 Blast hits to 4787 proteins in 1681 species: Archae - 54; Bacteria - 3006; Metazoa - 34; Fungi - 85; Plants - 379; Viruses - 0; Other Eukaryotes - 1236 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2608308..2611555 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111693.3 → NP_187471.1  Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187471.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A178VFA2, B9DFU6, Q8LF55, Q9M9K1
      UniProtKB/TrEMBL
      A0A384KAQ5, A0A654F6F1
      Conserved Domains (1) summary
      PLN02538
      Location:1 → 557
      PLN02538; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase

    2. NM_180211.2 → NP_850542.1  Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850542.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A178VFA2, B9DFU6, Q8LF55, Q9M9K1
      UniProtKB/TrEMBL
      A0A384KAQ5, A0A654F6F1
      Conserved Domains (1) summary
      PLN02538
      Location:1 → 557
      PLN02538; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M9K1.1

    Gene LinkOut

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