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    JAZ8 jasmonate-zim-domain protein 8 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839893, updated on 18-Sep-2024

    Summary

    Official Symbol
    JAZ8
    Official Full Name
    jasmonate-zim-domain protein 8
    Primary source
    TAIR:AT1G30135
    Locus tag
    AT1G30135
    See related
    Araport:AT1G30135
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    jasmonate-zim-domain protein 8; TIFY5A
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    Genomic context

    See JAZ8 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (10596352..10597341)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DUF1365 family protein Neighboring gene ncRNA Neighboring gene Myb/SANT-like DNA-binding domain protein Neighboring gene pseudo

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_102753.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    jasmonate-zim-domain protein 8
    NP_564349.1
    • jasmonate-zim-domain protein 8 (JAZ8); CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 7 (TAIR:AT2G34600.1); Has 89 Blast hits to 89 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10596352..10597341
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102753.4NP_564349.1  jasmonate-zim-domain protein 8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564349.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LBM2
      UniProtKB/TrEMBL
      A0A178W086, A0A5S9WD74
      Conserved Domains (2) summary
      smart00979
      Location:3974
      TIFY; This short possible domain is found in a variety of plant transcription factors that contain GATA domains as well as other motifs
      pfam09425
      Location:107127
      CCT_2; Divergent CCT motif