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    Calmodulin-binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829227, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Calmodulin-binding protein
    Primary source
    TAIR:AT4G31000
    Locus tag
    AT4G31000
    See related
    Araport:AT4G31000
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6I18.90; F6I18_90
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (15103120..15105979)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Calcineurin-like metallo-phosphoesterase superfamily protein Neighboring gene ncRNA Neighboring gene ubiquitin-associated protein (DUF1068) Neighboring gene RNA-binding CRS1 / YhbY (CRM) domain-containing protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene Putative membrane lipoprotein Neighboring gene CemA-like proton extrusion protein-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001203947.1
    NM_119250.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Calmodulin-binding protein
    NP_001190876.1
    • Calmodulin-binding protein; FUNCTIONS IN: calmodulin binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT2G24300.2).
    NP_194829.2
    • Calmodulin-binding protein; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT2G24300.2); Has 354 Blast hits to 312 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 351; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15103120..15105979
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119250.3 → NP_194829.2  Calmodulin-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194829.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JR57, O65550, Q8W454
      UniProtKB/TrEMBL
      A0A5S9XXX9, A0A654FUV5
      Conserved Domains (1) summary
      pfam07887
      Location:93 → 384
      Calmodulin_bind; Calmodulin binding protein-like

    2. NM_001203947.1 → NP_001190876.1  Calmodulin-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190876.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XXX9, A0A654FUV5, F4JR58
      Conserved Domains (1) summary
      pfam07887
      Location:88 → 363
      Calmodulin_bind; Calmodulin binding protein-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4JR57.1

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