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    Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823562, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein
    Primary source
    TAIR:AT3G44370
    Locus tag
    AT3G44370
    See related
    Araport:AT3G44370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    14
    Sequence:
    Chromosome: 3; NC_003074.8 (16030270..16035273, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene NAC domain containing protein 61 Neighboring gene ncRNA Neighboring gene Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. OXA2b is Crucial for Proper Membrane Insertion of COX2 during Biogenesis of Complex IV in Plant Mitochondria. Kolli R, et al. Plant Physiol, 2019 Feb. PMID 30487140, Free PMC Article
    2. The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. Brugière S, et al. Phytochemistry, 2004 Jun. PMID 15276431
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001339132.1
    NM_114305.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables membrane insertase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within mitochondrial cytochrome c oxidase assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within protein insertion into membrane IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion HDA PubMed 

    General protein information

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    Preferred Names
    Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein
    NP_190023.2
    • Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain; FUNCTIONS IN: binding; INVOLVED IN: protein insertion into membrane; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain (TAIR:AT1G65080.1); Has 1410 Blast hits to 1410 proteins in 539 species: Archae - 10; Bacteria - 840; Metazoa - 166; Fungi - 108; Plants - 98; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      16030270..16035273 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114305.4 → NP_190023.2  Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190023.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WUC5, Q7XJ56, Q9M288, Q9M289
      UniProtKB/TrEMBL
      A0A654FCM1
      Conserved Domains (3) summary
      sd00006
      Location:386 → 414
      TPR; TPR repeat [structural motif]
      pfam13414
      Location:386 → 446
      TPR_11; TPR repeat
      cl00489
      Location:77 → 356
      60KD_IMP; 60Kd inner membrane protein

    2. NM_001339132.1 → NP_001325751.1  Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LM69
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0WUC5.1

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