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    striatin-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831678, updated on 18-Sep-2024

    Summary

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    Official Full Name
    striatin-like protein
    Primary source
    TAIR:AT5G03060
    Locus tag
    AT5G03060
    See related
    Araport:AT5G03060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15A17.90; F15A17_90
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (716466..718014, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene IQ-domain 2 Neighboring gene knotted 1-binding protein Neighboring gene importin alpha isoform 9 Neighboring gene Phosphatidic acid phosphatase (PAP2) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_120384.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    striatin-like protein
    NP_195926.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11100.2); Has 14506 Blast hits to 10808 proteins in 1083 species: Archae - 280; Bacteria - 2737; Metazoa - 4707; Fungi - 940; Plants - 571; Viruses - 106; Other Eukaryotes - 5165 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      716466..718014 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120384.3 → NP_195926.1  striatin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195926.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UA56, Q9LYX9
      Conserved Domains (1) summary
      pfam07851
      Location:43 → 121
      TMPIT; TMPIT-like protein
    Nucleotide Protein
    Heading Accession and Version

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