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    RLP56 receptor like protein 56 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834989, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RLP56
    Official Full Name
    receptor like protein 56
    Primary source
    TAIR:AT5G49290
    Locus tag
    AT5G49290
    See related
    Araport:AT5G49290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATRLP56; K21P3.17; K21P3_17; receptor like protein 56
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    Genomic context

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    See RLP56 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Sequence:
    Chromosome: 5; NC_003076.8 (19979559..19984131)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene ncRNA Neighboring gene GATA transcription factor 16 Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001344834.1
    NM_001344835.1
    NM_124306.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within signal transduction IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    receptor like protein 56
    NP_199740.4
    • receptor like protein 56 (RLP56); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 14 (TAIR:AT1G74180.1); Has 112100 Blast hits to 30260 proteins in 1125 species: Archae - 53; Bacteria - 8278; Metazoa - 26127; Fungi - 1038; Plants - 68577; Viruses - 23; Other Eukaryotes - 8004 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19979559..19984131
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344828.1 → NP_001330457.1  receptor like protein 56 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A1P8BAV1, F4K4T3, Q56WY0, Q9FJ11
      Conserved Domains (3) summary
      sd00033
      Location:108 → 136
      LRR_RI; leucine-rich repeat [structural motif]
      pfam08263
      Location:31 → 75
      LRRNT_2; Leucine rich repeat N-terminal domain
      cl26793
      Location:55 → 868
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional

    2. NM_001344829.1 → NP_001330458.1  receptor like protein 56 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BAW9

    3. NM_001344830.1 → NP_001330456.1  receptor like protein 56 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BAV7

    4. NM_001344831.1 → NP_001330461.1  receptor like protein 56 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BAV8

    5. NM_001344832.1 → NP_001330459.1  receptor like protein 56 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BAV7

    6. NM_001344833.1 → NP_001330460.1  receptor like protein 56 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BAW2

    7. NM_124306.5 → NP_199740.4  receptor like protein 56 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199740.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K4T3
      Conserved Domains (4) summary
      cd00116
      Location:86 → 256
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:94 → 122
      LRR_RI; leucine-rich repeat [structural motif]
      pfam08263
      Location:17 → 61
      LRRNT_2; Leucine rich repeat N-terminal domain
      pfam13855
      Location:744 → 803
      LRR_8; Leucine rich repeat

    8. NM_001344834.1 → NP_001330454.1  receptor like protein 56 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BAV7

    9. NM_001344835.1 → NP_001330455.1  receptor like protein 56 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BAW0
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4K4T3.2

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