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    Toc90 Avirulence induced gene (AIG1) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832152, updated on 18-Sep-2024

    Summary

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    Official Symbol
    Toc90
    Official Full Name
    Avirulence induced gene (AIG1) family protein
    Primary source
    TAIR:AT5G20300
    Locus tag
    AT5G20300
    See related
    Araport:AT5G20300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F5O24.190; F5O24_190; translocon at the outer envelope membrane of chloroplasts 90
    Summary
    Encodes Toc90, part of the TOC (translocon at the outer chloroplast membrane) machinery involved in the import of nucleus-encoded proteins into the chloroplast.
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    Genomic context

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    See Toc90 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (6853299..6856981, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene sucrose phosphate synthase 1F Neighboring gene Ribosomal protein S8e family protein Neighboring gene Adenine nucleotide alpha hydrolases-like superfamily protein Neighboring gene dicer-like 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional specialization amongst the Arabidopsis Toc159 family of chloroplast protein import receptors. Kubis S, et al. Plant Cell, 2004 Aug. PMID 15273297, Free PMC Article
    2. The chloroplast import receptor Toc90 partially restores the accumulation of Toc159 client proteins in the Arabidopsis thaliana ppi2 mutant. Infanger S, et al. Mol Plant, 2011 Mar. PMID 21220583
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036834.1
    NM_001036835.1
    NM_001343650.1
    NM_001343651.1
    NM_122037.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein targeting to chloroplast IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in intracellular anatomical structure IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Avirulence induced gene (AIG1) family protein
    NP_001031912.1
    • Avirulence induced gene (AIG1) family protein; FUNCTIONS IN: GTP binding; LOCATED IN: chloroplast outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 979 Blast hits to 964 proteins in 184 species: Archae - 2; Bacteria - 204; Metazoa - 369; Fungi - 41; Plants - 292; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink).
    NP_001318609.1
    • Avirulence induced gene (AIG1) family protein; FUNCTIONS IN: GTP binding; LOCATED IN: chloroplast outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 993 Blast hits to 978 proteins in 186 species: Archae - 2; Bacteria - 206; Metazoa - 376; Fungi - 41; Plants - 292; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
    NP_197530.2
    • Avirulence induced gene (AIG1) family protein; FUNCTIONS IN: GTP binding; LOCATED IN: chloroplast outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 993 Blast hits to 978 proteins in 186 species: Archae - 2; Bacteria - 206; Metazoa - 376; Fungi - 41; Plants - 292; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      6853299..6856981 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122037.4 → NP_197530.2  Avirulence induced gene (AIG1) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197530.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2V361, Q6S5G3
      UniProtKB/TrEMBL
      A0A178UFT9
      Conserved Domains (4) summary
      cd01853
      Location:136 → 384
      Toc34_like; Translocon at the Outer-envelope membrane of Chloroplasts 34-like (Toc34-like)
      TIGR00993
      Location:54 → 772
      3a0901s04IAP86; chloroplast protein import component Toc86/159, G and M domains
      pfam11886
      Location:506 → 773
      TOC159_MAD; Translocase of chloroplast 159/132, membrane anchor domain
      pfam13476
      Location:419 → 504
      AAA_23; AAA domain

    2. NM_001343650.1 → NP_001318609.1  Avirulence induced gene (AIG1) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2V361, Q6S5G3
      UniProtKB/TrEMBL
      A0A178UFT9

    3. NM_001343651.1 → NP_001329949.1  Avirulence induced gene (AIG1) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2V361, Q6S5G3
      UniProtKB/TrEMBL
      A0A178UFT9

    4. NM_001036835.1 → NP_001031912.1  Avirulence induced gene (AIG1) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031912.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UFT9, F4K480
      Conserved Domains (3) summary
      cd01853
      Location:8 → 256
      Toc34_like; Translocon at the Outer-envelope membrane of Chloroplasts 34-like (Toc34-like)
      pfam11886
      Location:378 → 645
      TOC159_MAD; Translocase of chloroplast 159/132, membrane anchor domain
      pfam13476
      Location:291 → 376
      AAA_23; AAA domain

    5. NM_001036834.1 → NP_001031911.1  Avirulence induced gene (AIG1) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031911.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2V361, Q6S5G3
      UniProtKB/TrEMBL
      A0A178UFT9
      Conserved Domains (4) summary
      cd01853
      Location:136 → 384
      Toc34_like; Translocon at the Outer-envelope membrane of Chloroplasts 34-like (Toc34-like)
      TIGR00993
      Location:54 → 772
      3a0901s04IAP86; chloroplast protein import component Toc86/159, G and M domains
      pfam11886
      Location:506 → 773
      TOC159_MAD; Translocase of chloroplast 159/132, membrane anchor domain
      pfam13476
      Location:419 → 504
      AAA_23; AAA domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6S5G3.1

    Gene LinkOut

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