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    blanks blanks [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38620, updated on 9-Dec-2024

    Summary

    Official Symbol
    blanksprovided by FlyBase
    Official Full Name
    blanksprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035608
    Locus tag
    Dmel_CG10630
    See related
    AllianceGenome:FB:FBgn0035608
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Blanks; CG10630; Dmel\CG10630; lump
    Summary
    Enables siRNA binding activity. Involved in regulatory ncRNA-mediated post-transcriptional gene silencing and sperm individualization. Located in cytoplasm; heterochromatin; and nucleus. Is expressed in several structures, including male germline cell; organism subdivision; and testis. Orthologous to human ADARB2 (adenosine deaminase RNA specific B2 (inactive)). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See blanks in Genome Data Viewer
    Location:
    64D2-64D2; 3-14 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (5497523..5498958, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (5490623..5492058, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44520 Neighboring gene long non-coding RNA:CR44518 Neighboring gene long non-coding RNA:CR44519

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables double-stranded RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables siRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables siRNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in regulation of regulatory ncRNA processing IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulatory ncRNA-mediated post-transcriptional gene silencing IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in siRNA processing IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in sperm individualization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of RISC complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of RISC-loading complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in heterochromatin IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    blanks
    Names
    CG10630-PA
    blanks-PA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      5497523..5498958 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139709.2NP_647966.1  blanks [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647966.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MRY4, Q9VRL8
      Related
      FBpp0076856