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    Muc55B Mucin 55B [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37057, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Muc55Bprovided by FlyBase
    Official Full Name
    Mucin 55Bprovided by FlyBase
    Primary source
    FLYBASE:FBgn0034294
    Locus tag
    Dmel_CG5765
    See related
    AllianceGenome:FB:FBgn0034294
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5765; Dmel\CG5765
    Summary
    Predicted to be an extracellular matrix structural constituent. Predicted to be located in extracellular matrix. Is expressed in embryonic midgut chamber; embryonic/larval anterior midgut; embryonic/larval midgut; and organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Muc55B in Genome Data Viewer
    Location:
    55B2-55B2; 2-84 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18050019..18052107, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (13937524..13939612, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45313

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Differential splicing of the lectin domain of an O-glycosyltransferase modulates both peptide and glycopeptide preferences. May C, et al. J Biol Chem, 2020 Aug 28. PMID 32669364, Free PMC Article
    2. Histone gene replacement reveals a post-transcriptional role for H3K36 in maintaining metazoan transcriptome fidelity. Meers MP, et al. Elife, 2017 Mar 27. PMID 28346137, Free PMC Article
    3. A potential role for Drosophila mucins in development and physiology. Syed ZA, et al. PLoS One, 2008 Aug 22. PMID 18725942, Free PMC Article
    4. Seizure suppression by gain-of-function escargot mutations. Hekmat-Scafe DS, et al. Genetics, 2005 Mar. PMID 15654097, Free PMC Article
    5. The loss of histone H3 lysine 9 acetylation due to dSAGA-specific dAda2b mutation influences the expression of only a small subset of genes. Zsindely N, et al. Nucleic Acids Res, 2009 Nov. PMID 19740772, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables extracellular matrix structural constituent ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular matrix ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mucin 55B
    Names
    CG5765-PA
    CG5765-PB
    Muc55B-PA
    Muc55B-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      18050019..18052107 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299632.1 → NP_001286561.1  mucin 55B, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286561.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZB24
      Conserved Domains (1) summary
      pfam05267
      Location:52 → 170
      DUF725; Protein of unknown function (DUF725)

    2. NM_137441.3 → NP_611285.2  mucin 55B, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611285.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZB24
      Related
      FBpp0085988
      Conserved Domains (1) summary
      pfam05267
      Location:52 → 170
      DUF725; Protein of unknown function (DUF725)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1ZB24 A1ZB24
    Q8SXS5 Q8SXS5

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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