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    scpr-B SCP-containing protein B [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41357, updated on 9-Dec-2024

    Summary

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    Official Symbol
    scpr-Bprovided by FlyBase
    Official Full Name
    SCP-containing protein Bprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037888
    Locus tag
    Dmel_CG17210
    See related
    AllianceGenome:FB:FBgn0037888
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0140519.115; cg17210; CG17210; Dmel\CG17210; scp-B; SCPR-B
    Summary
    Predicted to be located in extracellular region. Orthologous to human R3HDML (R3H domain containing like) and PI15 (peptidase inhibitor 15). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See scpr-B in Genome Data Viewer
    Location:
    86D8-86D8; 3-50 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (11240041..11240991, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (7065763..7066713, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene SCP-containing protein A Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Human BOULE gene rescues meiotic defects in infertile flies. Xu EY, et al. Hum Mol Genet, 2003 Jan 15. PMID 12499397
    2. Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans. Begun DJ, et al. PLoS Biol, 2007 Nov 6. PMID 17988176, Free PMC Article
    3. Ocnus is essential for male germ cell development in Drosophila melanogaster. Zheng Y, et al. Insect Mol Biol, 2018 Oct. PMID 29732657
    4. Characterization of the SCP/TAPS gene family in Drosophila melanogaster. Kovalick GE, et al. Insect Biochem Mol Biol, 2005 Aug. PMID 15944079
    5. Single-cell transcriptome characteristics of testicular terminal epithelium lineages during aging in the Drosophila. Chen X, et al. Aging Cell, 2024 Mar. PMID 38044573, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SCP-containing protein B
    Names
    CG17210-PA
    SCP-Related-B
    scpr-B-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      11240041..11240991 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141804.2 → NP_650061.1  SCP-containing protein B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650061.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0GTC8, Q0GTC9, Q95SH9, Q9VGQ4
      Related
      FBpp0081838
      Conserved Domains (1) summary
      cd05380
      Location:58 → 210
      SCP_euk; SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes. This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8T3W8 Q8T3W8
    Q9VGQ4 Q9VGQ4

    Gene LinkOut

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