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    CG13954 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35959, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG13954provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033405
    Locus tag
    Dmel_CG13954
    See related
    AllianceGenome:FB:FBgn0033405
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13954
    Orthologs
    all
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    Genomic context

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    See CG13954 in Genome Data Viewer
    Location:
    45C5-45D1; 2-60 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (9309296..9389467, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (5196801..5276972, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene DNA fragmentation factor-related protein 2 Neighboring gene long non-coding RNA:CR45918 Neighboring gene Myd88 Neighboring gene uncharacterized protein Neighboring gene mir-987 stem loop Neighboring gene Odorant receptor 45a Neighboring gene uncharacterized protein Neighboring gene lethal (2) 03659 Neighboring gene Outer dynein arm dynein axonemal light chain 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of a suppressor of retinal degeneration in Drosophila photoreceptors. Georgiev P, et al. J Neurogenet, 2012 Sep. PMID 23043643
    2. The lack of recombination drives the fixation of transposable elements on the fourth chromosome of Drosophila melanogaster. Bartolomé C, et al. Genet Res, 2004 Apr. PMID 15219154
    3. The Genetic Basis for Variation in Sensitivity to Lead Toxicity in Drosophila melanogaster. Zhou S, et al. Environ Health Perspect, 2016 Jul. PMID 26859824, Free PMC Article
    4. The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster. Jehrke L, et al. Sci Rep, 2018 Apr 18. PMID 29670218, Free PMC Article
    5. Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing. Mazloomian A, et al. RNA Biol, 2015. PMID 26512413, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    mobile_element

    • Loc: c9361370-9352280 mobile_element_type = transposon:roo{}785

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13954-PC
    CG13954-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      9309296..9389467 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273893.1 → NP_001260822.1  uncharacterized protein Dmel_CG13954, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260822.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z7U1, L7ZF13

    2. NM_001103769.2 → NP_001097239.2  uncharacterized protein Dmel_CG13954, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097239.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z7U1, L7ZF13
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1Z7U1 A1Z7U1

    Gene LinkOut

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