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    sre-16 Serpentine Receptor, class E (Epsilon) [ Caenorhabditis elegans ]

    Gene ID: 189747, updated on 9-Dec-2024

    Summary

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    Official Symbol
    sre-16
    Official Full Name
    Serpentine Receptor, class E (Epsilon)
    Primary source
    WormBase:WBGene00012707
    Locus tag
    CELE_Y39C12A.5
    See related
    AllianceGenome:WB:WBGene00012707
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Is expressed in head; intestine; and nervous system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See sre-16 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    8
    Sequence:
    Chromosome: IV; NC_003282.8 (12234085..12236111, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene Serpentine Receptor, class E (Epsilon) Neighboring gene Serpentine Receptor, class E (Epsilon) Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class E (Epsilon)
    NP_502323.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      12234085..12236111 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069922.3 → NP_502323.2  Serpentine Receptor, class E (Epsilon) [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502323.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U2L6
      Conserved Domains (1) summary
      pfam03125
      Location:15 → 326
      Sre; C. elegans Sre G protein-coupled chemoreceptor
    Nucleotide Protein
    Heading Accession and Version

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