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    C56A3.4 RING-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179836, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C56A3.4
    Official Full Name
    RING-type domain-containing protein
    Primary source
    WormBase:WBGene00008343
    Locus tag
    CELE_C56A3.4
    See related
    AllianceGenome:WB:WBGene00008343
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable ubiquitin-protein transferase activity. Predicted to be located in membrane. Orthologous to human RNF26 (ring finger protein 26). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C56A3.4 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (13550516..13551754, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein;G_PROTEIN_RECEP_F1_2 domain-containing protein Neighboring gene ncRNA Neighboring gene Leucine-rich repeat-containing protein Neighboring gene EF-hand domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ubiquitin-protein transferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    RING-type domain-containing protein
    NP_001129886.1
    • Confirmed by transcript evidence
    NP_506354.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      13550516..13551754 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001136414.2 → NP_001129886.1  RING-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001129886.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B5U8M8
      Conserved Domains (2) summary
      cd00162
      Location:48 → 87
      RING_Ubox; modified RING-HC finger (C3HC5-type) [structural motif]
      pfam13920
      Location:45 → 92
      zf-C3HC4_3; Zinc finger, C3HC4 type (RING finger)

    2. NM_073953.7 → NP_506354.2  RING-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506354.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q18875
      Conserved Domains (2) summary
      cd00162
      Location:170 → 209
      RING_Ubox; modified RING-HC finger (C3HC5-type) [structural motif]
      pfam13920
      Location:167 → 214
      zf-C3HC4_3; Zinc finger, C3HC4 type (RING finger)
    Nucleotide Protein
    Heading Accession and Version

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