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    srj-18 Serpentine Receptor, class J [ Caenorhabditis elegans ]

    Gene ID: 191938, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srj-18
    Official Full Name
    Serpentine Receptor, class J
    Primary source
    WormBase:WBGene00005606
    Locus tag
    CELE_R05D8.2
    See related
    AllianceGenome:WB:WBGene00005606
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srj-18 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (2774342..2776258)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene DeHydrogenases, Short chain Neighboring gene Serpentine Receptor, class H Neighboring gene pseudo Neighboring gene Lipoprotein Neighboring gene Kettin homolog Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class J
    NP_001303747.1
    • Partially confirmed by transcript evidence
    NP_001303748.1
    • Partially confirmed by transcript evidence
    NP_001360560.1
    • Partially confirmed by transcript evidence
    NP_503756.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      2774342..2776258
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001316818.1 → NP_001303747.1  Serpentine Receptor, class J [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0M9JJ79
      Conserved Domains (1) summary
      pfam10319
      Location:1 → 312
      7TM_GPCR_Srj; Serpentine type 7TM GPCR chemoreceptor Srj

    2. NM_071355.2 → NP_503756.2  Serpentine Receptor, class J [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503756.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N5F9
      Conserved Domains (1) summary
      pfam10319
      Location:1 → 310
      7TM_GPCR_Srj; Serpentine type 7TM GPCR chemoreceptor Srj

    3. NM_001373005.1 → NP_001360560.1  Serpentine Receptor, class J [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A486WYK3
      Conserved Domains (1) summary
      cl22924
      Location:1 → 259
      7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd

    4. NM_001316819.1 → NP_001303748.1  Serpentine Receptor, class J [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0M7RFA4
      Conserved Domains (1) summary
      cl22924
      Location:1 → 257
      7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd
    Nucleotide Protein
    Heading Accession and Version

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