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    pqn-75 Basic proline-rich protein;Basic proline-rich protein-like;Prion-like-(Q/N-rich)-domain-bearing protein [ Caenorhabditis elegans ]

    Gene ID: 177165, updated on 9-Dec-2024

    Summary

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    Official Symbol
    pqn-75
    Official Full Name
    Basic proline-rich protein;Basic proline-rich protein-like;Prion-like-(Q/N-rich)-domain-bearing protein
    Primary source
    WormBase:WBGene00004157
    Locus tag
    CELE_W03D2.1
    See related
    AllianceGenome:WB:WBGene00004157
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in pharynx. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See pqn-75 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    8
    Sequence:
    Chromosome: IV; NC_003282.8 (4072327..4077645)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene F-box domain-containing protein Neighboring gene ncRNA Neighboring gene Secreted protein Neighboring gene CUB domain-containing protein Neighboring gene Secreted protein Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PQN-75 is expressed in the pharyngeal gland cells of Caenorhabditiselegans and is dispensable for germline development. Rochester JD, et al. Biol Open, 2017 Sep 15. PMID 28916707, Free PMC Article
    2. Perinuclear P granules are the principal sites of mRNA export in adult C. elegans germ cells. Sheth U, et al. Development, 2010 Apr. PMID 20223759, Free PMC Article
    3. A spatiotemporal reconstruction of the C. elegans pharyngeal cuticle reveals a structure rich in phase-separating proteins. Kamal M, et al. Elife, 2022 Oct 19. PMID 36259463, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    General protein information

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    Preferred Names
    Basic proline-rich protein;Basic proline-rich protein-like;Prion-like-(Q/N-rich)-domain-bearing protein
    NP_001294405.1
    • Product from WormBase gene class pqn;
      Confirmed by transcript evidence
    NP_741365.1
    • Confirmed by transcript evidence
    NP_741366.1
    • Confirmed by transcript evidence
    NP_741367.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      4072327..4077645
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_171311.7 → NP_741365.1  Basic proline-rich protein-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741365.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZ77
      Conserved Domains (1) summary
      PRK07764
      Location:325 → 513
      PRK07764; DNA polymerase III subunits gamma and tau; Validated

    2. NM_001307476.1 → NP_001294405.1  Prion-like-(Q/N-rich)-domain-bearing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294405.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PBP8

    3. NM_171903.7 → NP_741367.1  Basic proline-rich protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741367.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MQG8
      Conserved Domains (1) summary
      PRK07764
      Location:319 → 507
      PRK07764; DNA polymerase III subunits gamma and tau; Validated

    4. NM_171312.6 → NP_741366.1  Basic proline-rich protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741366.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MQG9
      Conserved Domains (1) summary
      PRK07764
      Location:337 → 528
      PRK07764; DNA polymerase III subunits gamma and tau; Validated

    RNA

    1. NR_131466.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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