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    mrpl-9 Large ribosomal subunit protein bL9m [ Caenorhabditis elegans ]

    Gene ID: 181833, updated on 9-Dec-2024

    Summary

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    Official Symbol
    mrpl-9
    Official Full Name
    Large ribosomal subunit protein bL9m
    Primary source
    WormBase:WBGene00015025
    Locus tag
    CELE_B0205.11
    See related
    AllianceGenome:WB:WBGene00015025
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of ribonucleoprotein complex. Predicted to be active in mitochondrion. Orthologous to human MRPL9 (mitochondrial ribosomal protein L9). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See mrpl-9 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003279.8 (10732543..10733666, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene TFG domain-containing protein Neighboring gene YtxH domain-containing protein Neighboring gene 26S proteasome non-ATPase regulatory subunit 4 Neighboring gene ncRNA Neighboring gene Casein kinase II subunit alpha Neighboring gene cysteine desulfurase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    3. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Large ribosomal subunit protein bL9m
    NP_492810.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      10732543..10733666 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060409.8 → NP_492810.2  Large ribosomal subunit protein bL9m [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492810.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95X39
      Conserved Domains (1) summary
      pfam01281
      Location:68 → 112
      Ribosomal_L9_N; Ribosomal protein L9, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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