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    BRXL1 BREVIS RADIX-like 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818126, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BRXL1
    Official Full Name
    BREVIS RADIX-like 1
    Primary source
    TAIR:AT2G35600
    Locus tag
    AT2G35600
    See related
    Araport:AT2G35600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA BREVIS RADIX LIKE 1; ATBRXL1; BREVIS RADIX-like 1; T32F12.2; T32F12_2
    Summary
    Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.
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    Genomic context

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    See BRXL1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (14940774..14945357, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene cystic fibrosis transmembrane conductance regulator Neighboring gene miscRNA Neighboring gene SWIB/MDM2 domain superfamily protein Neighboring gene xyloglucanase 113

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001336563.1
    NM_129113.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    BREVIS RADIX-like 1
    NP_565809.1
    • BREVIS RADIX-like 1 (BRXL1); CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591); BEST Arabidopsis thaliana protein match is: DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein (TAIR:AT1G31880.1); Has 628 Blast hits to 410 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 628; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14940774..14945357 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336562.1 → NP_001324041.1  BREVIS RADIX-like 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82281, Q8LAY6
      UniProtKB/TrEMBL
      A0A178VQ67, A0A5S9X4G1
      Conserved Domains (2) summary
      pfam08381
      Location:277 → 330
      BRX; Transcription factor regulating root and shoot growth via Pin3
      pfam13713
      Location:25 → 57
      BRX_N; Transcription factor BRX N-terminal domain

    2. NM_129113.5 → NP_565809.1  BREVIS RADIX-like 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565809.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82281, Q8LAY6
      UniProtKB/TrEMBL
      A0A178VQ67, A0A5S9X4G1
      Conserved Domains (2) summary
      pfam08381
      Location:277 → 330
      BRX; Transcription factor regulating root and shoot growth via Pin3
      pfam13713
      Location:25 → 57
      BRX_N; Transcription factor BRX N-terminal domain

    3. NM_001336563.1 → NP_001324042.1  BREVIS RADIX-like 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82281, Q8LAY6
      UniProtKB/TrEMBL
      A0A178VQ67, A0A5S9X4G1
      Conserved Domains (2) summary
      pfam08381
      Location:277 → 330
      BRX; Transcription factor regulating root and shoot growth via Pin3
      pfam13713
      Location:25 → 57
      BRX_N; Transcription factor BRX N-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O82281.2

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