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    dyggve-melchior-clausen syndrome protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839439, updated on 18-Sep-2024

    Summary

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    Official Full Name
    dyggve-melchior-clausen syndrome protein
    Primary source
    TAIR:AT1G04200
    Locus tag
    AT1G04200
    See related
    Araport:AT1G04200
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F20D22.3; F20D22_3
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    16
    Sequence:
    Chromosome: 1; NC_003070.9 (1109395..1114155)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene YUCCA 9 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene ncRNA Neighboring gene 3-ketoacyl-CoA synthase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001331468.1
    NM_100301.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    dyggve-melchior-clausen syndrome protein
    NP_171916.2
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dymeclin (InterPro:IPR019142); Has 395 Blast hits to 389 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 21; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1109395..1114155
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331467.1 → NP_001322388.1  dyggve-melchior-clausen syndrome protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ATW4, A0A5S9SHX0, A0A654E7X2

    2. NM_100301.5 → NP_171916.2  dyggve-melchior-clausen syndrome protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171916.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WDQ3, A0A5S9SHX0, A0A654E7X2, Q8RWV1
      Conserved Domains (1) summary
      pfam09742
      Location:1 → 677
      Dymeclin; Dyggve-Melchior-Clausen syndrome protein

    3. NM_001331468.1 → NP_001322389.1  dyggve-melchior-clausen syndrome protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ATY2, A0A5S9SHX0, A0A654E7X2
    Nucleotide Protein
    Heading Accession and Version

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