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    HVA22J HVA22-like protein J [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818175, updated on 18-Sep-2024

    Summary

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    Official Symbol
    HVA22J
    Official Full Name
    HVA22-like protein J
    Primary source
    TAIR:AT2G36020
    Locus tag
    AT2G36020
    See related
    Araport:AT2G36020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F11F19.7; F11F19_7; HVA22-like protein J
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    Genomic context

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    See HVA22J in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Sequence:
    Chromosome: 2; NC_003071.7 (15123120..15125588, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Putative lysine decarboxylase family protein Neighboring gene Mitochondrial transcription termination factor family protein Neighboring gene E2F transcription factor 3 Neighboring gene Ovate family protein Neighboring gene uncharacterized protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A membrane protein/signaling protein interaction network for Arabidopsis version AMPv2. Lalonde S, et al. Front Physiol, 2010. PMID 21423366, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_129161.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    HVA22-like protein J
    NP_565832.1
    • HVA22-like protein J (HVA22J); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: Abscisic acid-responsive (TB2/DP1, HVA22) family protein (TAIR:AT5G42560.1); Has 1423 Blast hits to 1423 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 697; Fungi - 144; Plants - 486; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15123120..15125588 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129161.3 → NP_565832.1  HVA22-like protein J [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565832.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GXE9, Q8LEZ1, Q9SJ48
      UniProtKB/TrEMBL
      A0A178VN77, A0A384LAQ8, A0MES1, Q1PEW5
      Conserved Domains (1) summary
      pfam03134
      Location:19 → 97
      TB2_DP1_HVA22; TB2/DP1, HVA22 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GXE9.2

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