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    AIG1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840293, updated on 18-Sep-2024

    Summary

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    Official Symbol
    AIG1
    Official Full Name
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Primary source
    TAIR:AT1G33960
    Locus tag
    AT1G33960
    See related
    Araport:AT1G33960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AVRRPT2-INDUCED GENE 1; F12G12.27
    Summary
    Identified as a gene that is induced by avirulence gene avrRpt2 and RPS2 after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2
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    Genomic context

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    See AIG1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (12346138..12348733)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Serine/Threonine-kinase ULK4-like protein Neighboring gene uncharacterized protein Neighboring gene Avirulence induced gene (AIG1) family protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene Smg-4/UPF3 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular characterization of a bHLH transcription factor involved in Arabidopsis abscisic acid-mediated response. Kim J, et al. Biochim Biophys Acta, 2006 Mar-Apr. PMID 16730809
    2. Isolation of Arabidopsis genes that differentiate between resistance responses mediated by the RPS2 and RPM1 disease resistance genes. Reuber TL, et al. Plant Cell, 1996 Feb. PMID 8742710, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. AtAIG1 protein plays an important role in abscisic acid-mediated signal transduction pathway
      Title: Molecular characterization of a bHLH transcription factor involved in Arabidopsis abscisic acid-mediated response.
    Submit: New GeneRIF Correction

    General gene information

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    NM_103118.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to bacterium IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    NP_174658.1
    • AVRRPT2-INDUCED GENE 1 (AIG1); FUNCTIONS IN: GTP binding; INVOLVED IN: response to bacterium; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: Avirulence induced gene (AIG1) family protein (TAIR:AT1G33950.1); Has 4495 Blast hits to 3349 proteins in 353 species: Archae - 20; Bacteria - 338; Metazoa - 1675; Fungi - 168; Plants - 255; Viruses - 14; Other Eukaryotes - 2025 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      12346138..12348733
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333075.1 → NP_001322563.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AUC4, A0A7G2DY08

    2. NM_103118.4 → NP_174658.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174658.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P54120
      UniProtKB/TrEMBL
      A0A178W6Y5, Q67Y39
      Conserved Domains (3) summary
      pfam04548
      Location:44 → 258
      AIG1; AIG1 family
      cd16269
      Location:318 → 329
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:249 → 347
      GBP_C; Guanylate-binding protein, C-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P54120.1

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