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    ORP3B OSBP(oxysterol binding protein)-related protein 3B [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820086, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ORP3B
    Official Full Name
    OSBP(oxysterol binding protein)-related protein 3B
    Primary source
    TAIR:AT3G09300
    Locus tag
    AT3G09300
    See related
    Araport:AT3G09300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    OSBP(oxysterol binding protein)-related protein 3B
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    Genomic context

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    See ORP3B in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (2857847..2860668)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene telomerase activator1 Neighboring gene ncRNA Neighboring gene membrane protein insertion efficiency factor Neighboring gene DHHC-type zinc finger family protein Neighboring gene Transmembrane amino acid transporter family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Protein and metabolite composition of Arabidopsis stress granules. Kosmacz M, et al. New Phytol, 2019 May. PMID 30664249
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_111764.4

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in cytoplasmic stress granule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    OSBP(oxysterol binding protein)-related protein 3B
    NP_187541.1
    • OSBP(oxysterol binding protein)-related protein 3B (ORP3B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein, conserved site (InterPro:IPR018494), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: Oxysterol-binding family protein (TAIR:AT5G02100.1); Has 2352 Blast hits to 2318 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 1124; Fungi - 669; Plants - 282; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2857847..2860668
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111764.4 → NP_187541.1  OSBP(oxysterol binding protein)-related protein 3B [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187541.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SR33
      UniProtKB/TrEMBL
      A0A178VKM3, A0A5S9XAD7
      Conserved Domains (1) summary
      pfam01237
      Location:75 → 427
      Oxysterol_BP; Oxysterol-binding protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SR33.1

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