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    BSK9 kinase with tetratricopeptide repeat domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820080, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BSK9
    Official Full Name
    kinase with tetratricopeptide repeat domain-containing protein
    Primary source
    TAIR:AT3G09240
    Locus tag
    AT3G09240
    See related
    Araport:AT3G09240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    brassinosteroid-signaling kinase 9
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    Genomic context

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    See BSK9 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (2835381..2838202, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L10 family protein Neighboring gene plastid transcriptionally active 13 Neighboring gene laccase 7 Neighboring gene myb domain protein 1 Neighboring gene Nuclear transport factor 2 (NTF2) family protein Neighboring gene ncRNA Neighboring gene Glycosyl hydrolase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    kinase with tetratricopeptide repeat domain-containing protein
    NP_187535.1
    • Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G01060.1); Has 27971 Blast hits to 27600 proteins in 1024 species: Archae - 10; Bacteria - 1536; Metazoa - 3854; Fungi - 205; Plants - 21349; Viruses - 84; Other Eukaryotes - 933 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2835381..2838202 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337809.1 → NP_001325594.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VBH8, A0A1I9LLQ2, A0A384KK65, A0A5S9XBJ6
      Conserved Domains (3) summary
      PLN03088
      Location:393 → 490
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:394 → 419
      TPR; TPR repeat [structural motif]
      cl21453
      Location:72 → 315
      PKc_like; Protein Kinases, catalytic domain

    2. NM_001337808.1 → NP_001325595.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VA65, A0A1I9LLQ3

    3. NM_111758.1 → NP_187535.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187535.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XBJ6, Q9SR39
      Conserved Domains (4) summary
      sd00006
      Location:379 → 404
      TPR; TPR repeat [structural motif]
      pfam00069
      Location:58 → 289
      Pkinase; Protein kinase domain
      pfam13414
      Location:379 → 436
      TPR_11; TPR repeat
      cl21453
      Location:57 → 300
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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