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    P-loop containing nucleoside triphosphate hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840294, updated on 18-Sep-2024

    Summary

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    Official Full Name
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Primary source
    TAIR:AT1G33970
    Locus tag
    AT1G33970
    See related
    Araport:AT1G33970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12G12.21; F12G12_21
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (12349304..12351318, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Avirulence induced gene (AIG1) family protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene Smg-4/UPF3 family protein Neighboring gene methyl esterase 14 Neighboring gene one-helix protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The IMMUNE-ASSOCIATED NUCLEOTIDE-BINDING 9 Protein Is a Regulator of Basal Immunity in Arabidopsis thaliana. Wang Y, et al. Mol Plant Microbe Interact, 2019 Jan. PMID 29958083
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001036059.2
    NM_001036060.3
    NM_001084178.2
    NM_001198205.2
    NM_103119.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of defense response to bacterium IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    colocalizes_with plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    NP_001031136.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: response to bacterium; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G09950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001031137.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: response to bacterium; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G33900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001077647.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: response to bacterium; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G09950.1); Has 5286 Blast hits to 4352 proteins in 536 species: Archae - 103; Bacteria - 667; Metazoa - 2039; Fungi - 248; Plants - 262; Viruses - 31; Other Eukaryotes - 1936 (source: NCBI BLink).
    NP_001185134.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: response to bacterium; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G09950.1).
    NP_564431.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: response to bacterium; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G09950.1); Has 5286 Blast hits to 4352 proteins in 536 species: Archae - 103; Bacteria - 667; Metazoa - 2039; Fungi - 248; Plants - 262; Viruses - 31; Other Eukaryotes - 1936 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      12349304..12351318 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001084178.2 → NP_001077647.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077647.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HT21, F4HT25, Q8H7C8, Q9C8V3, Q9FE56
      UniProtKB/TrEMBL
      A0A178WH03, A0A5S9WNG4
      Conserved Domains (2) summary
      PTZ00121
      Location:193 → 335
      PTZ00121; MAEBL; Provisional
      pfam04548
      Location:25 → 239
      AIG1; AIG1 family

    2. NM_001198205.2 → NP_001185134.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185134.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HT21, F4HT25, Q8H7C8, Q9C8V3, Q9FE56
      UniProtKB/TrEMBL
      A0A178WH03, A0A5S9WNG4
      Conserved Domains (2) summary
      PTZ00121
      Location:193 → 335
      PTZ00121; MAEBL; Provisional
      pfam04548
      Location:25 → 239
      AIG1; AIG1 family

    3. NM_001036059.2 → NP_001031136.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031136.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HT21, F4HT25, Q8H7C8, Q9C8V3, Q9FE56
      UniProtKB/TrEMBL
      A0A178WH03, A0A5S9WNG4
      Conserved Domains (2) summary
      PTZ00121
      Location:193 → 335
      PTZ00121; MAEBL; Provisional
      pfam04548
      Location:25 → 239
      AIG1; AIG1 family

    4. NM_103119.5 → NP_564431.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564431.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HT21, F4HT25, Q8H7C8, Q9C8V3, Q9FE56
      UniProtKB/TrEMBL
      A0A178WH03, A0A5S9WNG4
      Conserved Domains (2) summary
      PTZ00121
      Location:193 → 335
      PTZ00121; MAEBL; Provisional
      pfam04548
      Location:25 → 239
      AIG1; AIG1 family

    5. NM_001036060.3 → NP_001031137.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031137.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WH03
      Conserved Domains (1) summary
      pfam04548
      Location:25 → 239
      AIG1; AIG1 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4HT21.1

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